Publications using CGRB service: Affymetrix



   2009
     
Author    Pandelova I,  Betts M, Manning V, Wilhelm L, Mockler T, Ciuffetti L
Title  

 Analysis of Transcriptome Changes Induced by Ptr ToxA in Wheat Provides Insights into the Mechanisms of Plant Susceptibility

Citation    
PubMed ID    
     
Author    Bao Y, Dharmawardhana P, Arias R, Allen MB, Ma C, Strauss SH
Title    WUS and STM-based reporter genes for studying meristem development in poplar
Citation    Plant Cell Rep. 28(6):947-62
PubMed ID   19280192
     
Author    Golonzhka O, Liang X, Messaddeq N, Bornert JM, Campbell AL, Metzger D, Chambon P, Ganguli-Indra G, Leid M, Indra AK
Title    Dual Role of COUP-TF-Interacting Protein 2 in Epidermal Homeostasis and Permeability Barrier
Citation    J Invest Dermatol. 129(6):1459-70
PubMed ID    19092943
     

   2008
     
Author   Vargas MR, Pehar M, Díaz-Amarilla PJ, Beckman JS, Barbeito L
Title    Transcriptional profile of primary astrocytes expressing ALS-linked mutant SOD1
Citation    J Neurosci Res. 86:3515-25
PubMed ID    18683239
     
Author    Park S, Ely RL
Title    Whole-genome transcriptional and physiological responses of Nitrosomonas europaea to cyanide: Identification of cyanide stress response genes
Citation    Biotechnol Bioeng. 102:1645-53
PubMed ID    19072843
     
Author    Tilton F, Tanguay RL
Title    Exposure to sodium metam during zebrafish somitogenesis results in early transcriptional indicators of the ensuing neuronal and muscular dysfunction
Citation    Toxicol Sci. 106(1):103-12
PubMed ID    18648088
     
Author    Mathew LK, Sengupta SS, Ladu J, Andreasen EA, Tanguay RL
Title   Crosstalk between AHR and Wnt signaling through R-Spondin1 impairs tissue regeneration in zebrafish
Citation    FASEB J. 22:3087-96
PubMed ID    18495758
     
Author    Kioussi C, Gross MK
Title    How to Build Transcriptional Network Models of Mammalian Pattern Formation
Citation    PLoS ONE 3(5): e2179
PubMed ID    
     
Author    Park S, Ely RL
Title   Candidate Stress Genes of Nitrosomonas europaea to Monitor Inhibition of Nitrification by Heavy Metals
Citation    Appl Environ Microbiol. 74(17):5475-82
PubMed ID    18606795
     
Author    Radniecki T,  Dolan M,  Semprini L
Title    Physiological and Transcriptional Responses of Nitrosomonas europaea to Toluene and Benzene Inhibition
Citation    Environ. Sci. Technol. 42: 4093–4098
PubMed ID    18589971
     
Author    Yan M, Song Y, Wong CP, Hardin K, Ho E
Title    Zinc Deficiency Alters DNA Damage Response Genes in Normal Human Prostate Epithelial Cells
Citation    J Nutr. 13:667-73
PubMed ID    18356318
     

   2007
     
Author    Park S, Ely RL
Title    Genome-wide transcriptional responses of Nitrosomonas europaea to zinc
Citation    Arch Microbiol. 189:541-8
PubMed ID    18097650
     
Author   Gvakharia B, Permina E, Gelfand M, Bottomley P, Sayavedra-Soto L and Arp DJ
Title   Global Trans criptional Response of Nitrosomonas europaea to Chloroform and Chloromethane
Citation   Appl and Envir Microbiol. 73:3440-3445
PubMed ID   17369330
     
Author   Liu P-P, Montgomery TA, Fahlgren N, Kasschau KD, Nonogaki H, Carrington JC
Title   Repression of AUXIN RESPONSE FACTOR10 by microRNA160 is critical for seed germination and post-germination stages
Citation   Plant J. 52:133-46
PubMed ID   17672844
     
Author   Nonogaki H
Title   Repression of transcription factors by microRNA during seed germination and postgerminaiton: Another level of molecular repression in seeds?
Citation   Plant Signaling and Behavior 3(2) (addendum)
PubMed ID    
     
Author   Sharma A, Awasthi S, Harrod C, Matlock E, Khan S, Xu L, Chan S, Yang H, Thammavaram C, Rasor R, Burns D, Skiest D, Van Lint C, Girard AM, McGee M, Monnat, Jr. R, and Harrod R
Title   The Werner Syndrome Helicase Is a Cofactor for HIV-1 Long Terminal Repeat Transactivation and Retroviral Replication
Citation   J. Biol. Chem.  282:12048 - 12057
PubMed ID   17317667
     
Author   Fahlgren N. Howell M, Kasschau K, Chapman E, Sullivan C, Cumbie J, Givan S, Law S, Grant S, Dangl J and Carrington JC
Title   High-Throughput Sequencing of Arabidopsis microRNAs: Evidence for Frequent Birth and Death of MRNA Genes
Citation   PLoSOne 2:E219
PubMed ID    CID:  1790633
     

   2006  
     
Author   Andreasen E, Mathew L and Tanguay RL
Title   Regenerative growth is impacted by TCDD: gene expression analysis reveals extracellular matrix modulation
Citation   Toxicol Sci. 92:254-69
PubMed ID   16443690
     
Author   Hooven LA, Butler J, Ream LW and Whanger PD
Title   Microarray analysis of selenium-depleted and selenium-supplemented mice
Citation   Biol Trace Elem Res., 109:173-79
PubMed ID   16444006
     
Author   Kioussi C, Shih H, Loflin J and Gross MK
Title   Prediction of Active Nodes in the Transcriptional Network of Neural Tube Patterning
Citation   Proc Natl Acad Sci U S A 103:18621-18626
PubMed ID   17132738
     
Author   Topark-Ngarm A, Golonzhka O, Peterson VJ, Barrett B Jr., Martinez B, Crofoot K, Filtz TM and Leid M
Title    CTIP2 associates with the NuRD complex on the promoter of p57KIP2, a newly identified CTIP2 target gene
Citation   J Biol Chem. 281:32272 - 32283.
PubMed ID   16950772
     
     2005
     
Author    Allen E, Xie Z, Gustafson AM, and Carrington JC
Title    MicroRNA-directed phasing during trans-acting siRNA biogenesis in plants
Citation    Cell 121:207-221
PubMed ID    15851028
     
Author    Awasthi S, Sharma A, Wong K, Zhang J, Matlock EF, Rogers L, Motloch P, Takemoto S, Taguchi H, Cole MD, Luscher B, Dittrich O, Tagami H. Nakatani Y, McGee M, Girard AM, Gaughan L. Robson CN, Monnat RJ Jr, and Harrod R
Title    A human T-cell lymphotropic virus type 1 enhancer of Myc transforming potential stabilizes Myc-TIP60 transcriptional interactions
Citation    Mol Cell Biol. 25: 6178 - 6198
PubMed ID    15988028
     
Author    Xie Z, Allen E, Wilken A and Carrington JC
Title    DICER-LIKE 4 functions in trans-acting siRNA biogenesis and vegetative phase change in Arabidopsis thaliana
Citation    Proc. Natl. Acad. Sci. USA 102:12984-12989
PubMed ID    16129836